Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_1371Hypothetical protein; 1 probable transmembrane helix predicted by modhmm. (342 aa)    
Predicted Functional Partners:
TGAM_1369
ABC transporter, ATP-binding protein.
       0.768
TGAM_1370
ABC-2 type transport system permease component, putative; 6 probable transmembrane helices predicted by modhmm.
       0.762
TGAM_1372
Conserved hypothetical protein; Belongs to DUF192 family; Belongs to the UPF0127 family.
       0.575
pfdA-2
Prefoldin alpha subunit (pfdA); Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
       0.419
pfdB
Prefoldin beta subunit (pfdB).
       0.419
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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