Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_1473Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm. (284 aa)    
Predicted Functional Partners:
TGAM_1474
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.672
TGAM_1469
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.620
TGAM_1470
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.616
TGAM_1466
Conserved hypothetical protein.
     
 0.600
TGAM_1471
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.599
TGAM_1472
Hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.592
TGAM_1467
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.554
TGAM_1475
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.521
TGAM_1468
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
     
 0.516
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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