STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_1512Conserved hypothetical protein. (85 aa)    
Predicted Functional Partners:
gph
Hydrolase, HAD superfamily, Putative phosphoglycolate phosphatase (gph).
       0.762
TGAM_1514
Conserved hypothetical protein; virR related protein, belongs to UPF0066 family.
       0.762
metG
Methionyl-tRNA synthetase (metG); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.573
moxR-3
moxR-type AAA ATPase, putative chaperone protein (moxR).
       0.523
TGAM_1517
Conserved hypothetical protein; 6 probable transmembrane helices predicted by modhmm.
       0.523
TGAM_1518
MoxR associated protein, containing DUF58 domain; 1 probable transmembrane helix predicted by modhmm.
       0.520
TGAM_1519
Hypothetical protein; 6 probable transmembrane helices predicted by modhmm.
       0.520
TGAM_1516
Hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
       0.519
TGAM_1510
Hypothetical protein.
       0.432
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.