Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cheYChemotaxis response regulator (cheY). (122 aa)    
Predicted Functional Partners:
cheA
Chemotaxis histidine kinase (cheA).
 
 
 0.999
cheC
Chemotaxis protein CheC-like protein (cheC).
  
 
 0.986
TGAM_1527
Conserved hypothetical protein.
   
 
 0.973
flaG
Archaeal flagellar protein G (flaG); 1 probable transmembrane helix predicted by modhmm.
  
    0.711
flaC
Flagella accessory protein C (flaC).
  
  
 0.701
TGAM_1526
Quinoprotein dehydrogenase, putative; Contains 6 Beta-propeller repeats (SM00564); 1 probable transmembrane helix predicted by modhmm.
     
 0.689
TGAM_1525
Conserved hypothetical protein; Contains HEAT and Armadillo/beta-catenin-like (ARM) repeats.
       0.676
flaD/E
Flagella accessory protein D or E (flaD/E).
  
  
 0.647
flaJ
Flagella-related protein J, type II secretion system protein F (flaJ); 9 probable transmembrane helices predicted by modhmm.
  
  
 0.640
TGAM_1855
Amino acid transporter; 12 probable transmembrane helices predicted by modhmm.
 
   
 0.622
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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