Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
flaB3Flagellin B3 precursor (flaB3); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (219 aa)    
Predicted Functional Partners:
flaC
Flagella accessory protein C (flaC).
  
  
 0.974
flaD/E
Flagella accessory protein D or E (flaD/E).
 
  
 0.970
flaJ
Flagella-related protein J, type II secretion system protein F (flaJ); 9 probable transmembrane helices predicted by modhmm.
 
  
 0.958
flaH
Flagella-related protein H, putative ATPase (flaH).
 
  
 0.957
flaI
Flagella-related protein I, type II/IV secretion system protein E (flaI).
 
  
 0.942
flaB1
Flagellin B1 precursor (flaB1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
    
0.902
flaG
Archaeal flagellar protein G (flaG); 1 probable transmembrane helix predicted by modhmm.
  
  
 0.873
flaF
Archaeal flagellar protein F (flaF); 1 probable transmembrane helix predicted by modhmm.
  
  
 0.860
flaB4
Flagellin B4 precursor (flaB4); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
    
0.859
flaB5
Flagellin B5 precursor (flaB5); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
    
0.854
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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