Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TGAM_1663Conserved hypothetical protein; Belongs to DUF402 family. (163 aa)    
Predicted Functional Partners:
glyS
Glycyl-tRNA synthetase (glyS); Catalyzes the attachment of glycine to tRNA(Gly).
 
     0.695
TGAM_1666
Conserved hypothetical protein; Belongs to the UPF0235 family.
       0.649
TGAM_1664
Phosphatidylethanolamine-binding protein.
       0.580
TGAM_1749
Conserved hypothetical protein; Possibly a cell adhesion protein. Contains 9 APHP/CARDB and 2 PKD domains; 1 probable transmembrane helix predicted by modhmm.
  
     0.538
TGAM_1662
Metallophosphoesterase; 2 probable transmembrane helices predicted by modhmm.
 
     0.515
TGAM_1748
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
  
     0.479
TGAM_2006
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
  
     0.478
TGAM_0787
RNA methylase, putative; Belongs to UPF0020 family.
  
     0.416
blaI
Penicillinase repressor-like protein (BlaI).
  
     0.409
TGAM_0182
AAA family ATPase, possibly ruvB related.
  
     0.404
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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