Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TGAM_1671Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
coaBC
Coenzyme A biosynthesis bifunctional protein coaBC (coaBC); Includes Phosphopantothenoylcysteine decarboxylase and Phosphopantothenate--cysteine ligase.
       0.807
TGAM_1672
Conserved hypothetical protein; Belongs to GlnB-like superfamily.
       0.784
crcB
Chromosome condensation protein, crcB-like protein (crcB); Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.784
TGAM_1674
Conserved hypothetical protein.
       0.624
TGAM_1670
Conserved hypothetical protein; Belongs to DUF835 family; 3 probable transmembrane helices predicted by modhmm.
       0.581
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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