Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_1697Hydrolase, alpha/beta superfamily; 1 probable transmembrane helix predicted by modhmm. (288 aa)    
Predicted Functional Partners:
TGAM_1696
Permease, major facilitator superfamily; 12 probable transmembrane helices predicted by modhmm.
 
     0.951
TGAM_1695
Permease, major facilitator superfamily; 12 probable transmembrane helices predicted by modhmm.
 
     0.926
TGAM_1694
Glycerophosphoryl diester phosphodiesterase related protein.
 
   
 0.864
glpQ
Glycerophosphoryl diester phosphodiesterase (glpQ).
 
   
 0.841
TGAM_0468
ATP-dependent protease, archaeal Lon-like protein; 2 probable transmembrane helices predicted by modhmm; Belongs to the peptidase S16 family.
    
 0.548
TGAM_2142
Glycosyltransferase, family 1.
 
 
 
 0.528
TGAM_0409
Glycosyltransferase, family 1.
 
 
 
 0.511
TGAM_1332
Thioesterase, putative.
    
 0.462
TGAM_1937
ATP binding protein, XPA-binding protein 1-like protein.
   
 0.449
TGAM_0013
Glycoside hydrolase, family 57, putative; 1 probable transmembrane helix predicted by modhmm.
 
    0.435
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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