Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rps4ESSU ribosomal protein S4E (rps4E); Belongs to the eukaryotic ribosomal protein eS4 family. (243 aa)    
Predicted Functional Partners:
rps24E
SSU ribosomal protein S24E (rps24E); Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.999
rpl37AE
LSU ribosomal protein L37AE (rpl37AE).
 
 
 0.999
rps17E
SSU ribosomal protein S17E (rps17E); Belongs to the eukaryotic ribosomal protein eS17 family.
  
 0.999
rps3AE
SSU ribosomal protein S3AE (rps3AE); Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.999
rps15P
SSU ribosomal protein S15P (rps15P).
  
 0.999
rps10P
SSU ribosomal protein S10P (rps10P); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 0.999
rps19E
SSU ribosomal protein S19E (rps19E); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 0.999
rps6E
SSU ribosomal protein S6E (rps6E); Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.999
rpl15E
LSU ribosomal protein L15E (rpl15E); Belongs to the eukaryotic ribosomal protein eL15 family.
  
 
 0.999
rps28E
SSU ribosomal protein S28E (rps28E); Belongs to the eukaryotic ribosomal protein eS28 family.
   
 0.999
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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