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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_2014AAA family ATPase, type II secretion system protein. (193 aa)    
Predicted Functional Partners:
TGAM_1749
Conserved hypothetical protein; Possibly a cell adhesion protein. Contains 9 APHP/CARDB and 2 PKD domains; 1 probable transmembrane helix predicted by modhmm.
 
     0.651
TGAM_0840
Predicted permease; Belongs to DUF81 family; 9 probable transmembrane helices predicted by modhmm.
  
     0.602
asnS-2
Asparaginyl-tRNA synthetase related protein (asnS).
       0.559
TGAM_0661
Conserved hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
  
     0.544
TGAM_1748
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
 
    0.523
TGAM_1675
Arginase related protein; Belongs to the arginase family.
  
     0.520
TGAM_1522
Conserved hypothetical protein.
  
     0.513
TGAM_0937
Oligosaccharyl transferase, STT3 subunit; 13 probable transmembrane helices predicted by modhmm.
  
     0.474
TGAM_2006
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
  
     0.474
TGAM_1114
Membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase; 10 probable transmembrane helices predicted by modhmm.
  
     0.472
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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