node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TGAM_0464 | TGAM_1424 | TGAM_0464 | TGAM_1424 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | RNA-binding protein, containing KH domain. | 0.988 |
TGAM_0464 | csl4 | TGAM_0464 | TGAM_1005 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | RNA-binding protein, containing S1 RNA binding domain; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.949 |
TGAM_0464 | rps11P | TGAM_0464 | TGAM_1967 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | SSU ribosomal protein S11P (rps11P); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.985 |
TGAM_0464 | rps4P | TGAM_0464 | TGAM_1968 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | SSU ribosomal protein S4P (rps4P); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.981 |
TGAM_0464 | rps5P | TGAM_0464 | TGAM_1982 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | SSU ribosomal protein S5P (rps5P); With S4 and S12 plays an important role in translational accuracy. | 0.964 |
TGAM_0464 | rps6E | TGAM_0464 | TGAM_1634 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | SSU ribosomal protein S6E (rps6E); Belongs to the eukaryotic ribosomal protein eS6 family. | 0.995 |
TGAM_0464 | rrp42p | TGAM_0464 | TGAM_2035 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | 3'-5' exoribonuclease, exosome complex exonuclease 2, Rrp42p-like protein (Rrp42p); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.944 |
TGAM_0464 | rrp4p | TGAM_0464 | TGAM_2037 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | Exosome complex RNA-binding protein 1, Rrp4p-like protein (Rrp4p); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.921 |
TGAM_0464 | rtcA | TGAM_0464 | TGAM_2020 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | RNA 3'-terminal phosphate cyclase (rtcA); Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.945 |
TGAM_0464 | tmcA | TGAM_0464 | TGAM_1337 | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | Predicted P-loop ATPase fused to an acetyltransferase (GNAT) family; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.999 |
TGAM_1424 | TGAM_0464 | TGAM_1424 | TGAM_0464 | RNA-binding protein, containing KH domain. | pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related. | 0.988 |
TGAM_1424 | csl4 | TGAM_1424 | TGAM_1005 | RNA-binding protein, containing KH domain. | RNA-binding protein, containing S1 RNA binding domain; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.965 |
TGAM_1424 | rps11P | TGAM_1424 | TGAM_1967 | RNA-binding protein, containing KH domain. | SSU ribosomal protein S11P (rps11P); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
TGAM_1424 | rps4P | TGAM_1424 | TGAM_1968 | RNA-binding protein, containing KH domain. | SSU ribosomal protein S4P (rps4P); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
TGAM_1424 | rps5P | TGAM_1424 | TGAM_1982 | RNA-binding protein, containing KH domain. | SSU ribosomal protein S5P (rps5P); With S4 and S12 plays an important role in translational accuracy. | 0.999 |
TGAM_1424 | rps6E | TGAM_1424 | TGAM_1634 | RNA-binding protein, containing KH domain. | SSU ribosomal protein S6E (rps6E); Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
TGAM_1424 | rrp42p | TGAM_1424 | TGAM_2035 | RNA-binding protein, containing KH domain. | 3'-5' exoribonuclease, exosome complex exonuclease 2, Rrp42p-like protein (Rrp42p); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.950 |
TGAM_1424 | rrp4p | TGAM_1424 | TGAM_2037 | RNA-binding protein, containing KH domain. | Exosome complex RNA-binding protein 1, Rrp4p-like protein (Rrp4p); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.936 |
TGAM_1424 | rtcA | TGAM_1424 | TGAM_2020 | RNA-binding protein, containing KH domain. | RNA 3'-terminal phosphate cyclase (rtcA); Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.907 |
TGAM_1424 | tmcA | TGAM_1424 | TGAM_1337 | RNA-binding protein, containing KH domain. | Predicted P-loop ATPase fused to an acetyltransferase (GNAT) family; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.999 |