Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
TGAM_2126Signal peptidase, peptidase S26B; 2 probable transmembrane helices predicted by modhmm. (191 aa)    
Predicted Functional Partners:
TGAM_0103
Signal peptidase, peptidase S26B; 1 probable transmembrane helix predicted by modhmm.
  
  
  0.938
TGAM_0495
Signal peptidase I, S26B/S24 family; Serine protease; 4 probable transmembrane helices predicted by modhmm.
  
  
  0.916
miaB
RNA modification enzyme, MiaB family (MiaB).
 
    0.784
TGAM_2127
Hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.764
rnhB
Ribonuclease HII (rnhB); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
  
 0.510
gltT
Proton/sodium-glutamate symport protein (gltT); 8 probable transmembrane helices predicted by modhmm.
 
   
 0.489
carS
Conserved hypothetical protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
   
   0.408
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
     
 0.400
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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