Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_2134HAD superfamily (subfamily IA) hydrolase. (239 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase (cdsA); 3 probable transmembrane helices predicted by modhmm.
       0.914
amyA-2
Alpha-amylase (amyA).
       0.852
TGAM_2135
Conserved hypothetical protein; Contains DUF131 domain; 2 probable transmembrane helices predicted by modhmm.
       0.837
napA
Na+/H+ antiporter (napA); 12 probable transmembrane helices predicted by modhmm.
       0.837
mfnA
L-tyrosine decarboxylase (mfnA); Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily.
  
    0.826
TGAM_1456
Hydrolase, HAD superfamily.
  
     0.565
gph
Hydrolase, HAD superfamily, Putative phosphoglycolate phosphatase (gph).
 
   
 0.482
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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