Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_2144Hypothetical protein. (144 aa)    
Predicted Functional Partners:
TGAM_2141
Glycosyltransferase, family 2.
  
  
 0.805
TGAM_2143
Asparagine synthetase related protein.
  
  
 0.790
TGAM_2142
Glycosyltransferase, family 1.
      
0.773
TGAM_2145
Glycosyltransferase, family 1, putative.
       0.773
TGAM_2140
Hypothetical protein; Putative polysaccharide polymerization protein.
       0.757
algD
GDP-mannose 6-dehydrogenase (algD).
  
  
 0.709
TGAM_2148
Glycosyltransferase, family 2.
  
  
 0.631
galU
UTP-glucose-1-phosphate uridylyltransferase (galU).
     
 0.611
degT
Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.563
TGAM_2149
Acetyl/acyl transferase related protein.
  
  
 0.545
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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