STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_2145Glycosyltransferase, family 1, putative. (380 aa)    
Predicted Functional Partners:
TGAM_2142
Glycosyltransferase, family 1.
 
     0.830
TGAM_2143
Asparagine synthetase related protein.
 
  
 0.822
TGAM_2141
Glycosyltransferase, family 2.
  
  
 0.805
TGAM_2144
Hypothetical protein.
       0.773
TGAM_2140
Hypothetical protein; Putative polysaccharide polymerization protein.
       0.757
algD
GDP-mannose 6-dehydrogenase (algD).
  
  
 0.709
TGAM_2149
Acetyl/acyl transferase related protein.
 
  
 0.684
galU
UTP-glucose-1-phosphate uridylyltransferase (galU).
 
   
 0.659
TGAM_2148
Glycosyltransferase, family 2.
  
  
 0.635
TGAM_2152
NDP-sugar dehydrogenase, containing HINT/DOD homing endonuclease intein; Intein span: 280 - 748.
 
  
 0.625
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.