STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galUUTP-glucose-1-phosphate uridylyltransferase (galU). (292 aa)    
Predicted Functional Partners:
algD
GDP-mannose 6-dehydrogenase (algD).
  
 0.996
galE-2
UDP-glucose 4-epimerase, putative (galE); Does not match IPR005888 dTDP-glucose 4,6-dehydratase entry.
 
 
 0.945
TGAM_0017
Sugar-phosphate nucleotydyltransferase.
 
  
 0.935
pgm
Phosphoglucomutase (pgm).
   
 0.935
glgA
Glycogen synthase (glgA).
    
 0.927
galE-1
UDP-glucose 4-epimerase (galE).
  
 
 0.925
TGAM_0642
Sugar-phosphate nucleotydyltransferase.
 
  
0.920
glgP
Alpha-glucan phosphorylase (glgP).
     
 0.920
amyA-2
Alpha-amylase (amyA).
    
  0.900
manA
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase, bifunctional enzyme (manA/manC); Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.886
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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