Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_2152NDP-sugar dehydrogenase, containing HINT/DOD homing endonuclease intein; Intein span: 280 - 748. (919 aa)    
Predicted Functional Partners:
degT
Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.944
TGAM_2151
Oxidoreductase, substrate unknown; Belongs to the GFO/IDH/MOCA family.
 
  
 0.921
TGAM_2149
Acetyl/acyl transferase related protein.
 
   
 0.865
TGAM_2153
Glycosyltransferase, family 2; 2 probable transmembrane helices predicted by modhmm.
  
  
 0.785
flaB3
Flagellin B3 precursor (flaB3); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
      
 0.783
flaB4
Flagellin B4 precursor (flaB4); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
      
 0.783
flaB5
Flagellin B5 precursor (flaB5); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
      
 0.783
flaC
Flagella accessory protein C (flaC).
      
 0.783
algD
GDP-mannose 6-dehydrogenase (algD).
 
   
0.722
TGAM_2154
Conserved hypothetical protein; Belongs to DUF354 family.
 
   
 0.685
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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