Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_2156Carbamoylphosphate synthase large subunit region, short form. (349 aa)    
Predicted Functional Partners:
TGAM_2154
Conserved hypothetical protein; Belongs to DUF354 family.
 
     0.833
pigl
N-acetylglucosaminylphosphatidylinositol deacetylase, putative (Pigl).
 
     0.819
TGAM_2153
Glycosyltransferase, family 2; 2 probable transmembrane helices predicted by modhmm.
 
     0.804
TGAM_2152
NDP-sugar dehydrogenase, containing HINT/DOD homing endonuclease intein; Intein span: 280 - 748.
       0.518
degT
Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); Belongs to the DegT/DnrJ/EryC1 family.
       0.487
TGAM_2149
Acetyl/acyl transferase related protein.
       0.478
TGAM_2151
Oxidoreductase, substrate unknown; Belongs to the GFO/IDH/MOCA family.
       0.456
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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