Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS29743.1 | SFS33279.1 | SAMN04488006_0268 | SAMN04488006_0742 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transketolase. | 0.869 |
SFS29743.1 | SFS34357.1 | SAMN04488006_0268 | SAMN04488006_0828 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transketolase. | 0.872 |
SFS29743.1 | SFS40880.1 | SAMN04488006_0268 | SAMN04488006_1150 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribose 5-phosphate isomerase B. | 0.794 |
SFS29743.1 | SFS41988.1 | SAMN04488006_0268 | SAMN04488006_1235 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribose-phosphate pyrophosphokinase. | 0.437 |
SFS29743.1 | SFS52508.1 | SAMN04488006_0268 | SAMN04488006_1829 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.928 |
SFS29743.1 | SFS52607.1 | SAMN04488006_0268 | SAMN04488006_1837 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.786 |
SFS29743.1 | SFS58658.1 | SAMN04488006_0268 | SAMN04488006_2075 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.908 |
SFS29743.1 | tal | SAMN04488006_0268 | SAMN04488006_0300 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.929 |
SFS29743.1 | tpiA | SAMN04488006_0268 | SAMN04488006_1758 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.594 |
SFS33279.1 | SFS29743.1 | SAMN04488006_0742 | SAMN04488006_0268 | Transketolase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.869 |
SFS33279.1 | SFS33321.1 | SAMN04488006_0742 | SAMN04488006_0746 | Transketolase. | Histidine phosphatase superfamily (branch 1). | 0.909 |
SFS33279.1 | SFS34357.1 | SAMN04488006_0742 | SAMN04488006_0828 | Transketolase. | Transketolase. | 0.999 |
SFS33279.1 | SFS40880.1 | SAMN04488006_0742 | SAMN04488006_1150 | Transketolase. | Ribose 5-phosphate isomerase B. | 0.869 |
SFS33279.1 | SFS41988.1 | SAMN04488006_0742 | SAMN04488006_1235 | Transketolase. | Ribose-phosphate pyrophosphokinase. | 0.853 |
SFS33279.1 | SFS52508.1 | SAMN04488006_0742 | SAMN04488006_1829 | Transketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.855 |
SFS33279.1 | SFS52607.1 | SAMN04488006_0742 | SAMN04488006_1837 | Transketolase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.913 |
SFS33279.1 | SFS58658.1 | SAMN04488006_0742 | SAMN04488006_2075 | Transketolase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.851 |
SFS33279.1 | tal | SAMN04488006_0742 | SAMN04488006_0300 | Transketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.895 |
SFS33279.1 | tpiA | SAMN04488006_0742 | SAMN04488006_1758 | Transketolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.851 |
SFS33321.1 | SFS33279.1 | SAMN04488006_0746 | SAMN04488006_0742 | Histidine phosphatase superfamily (branch 1). | Transketolase. | 0.909 |
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