STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS40283.1TonB-dependent Receptor Plug Domain. (836 aa)    
Predicted Functional Partners:
SFS40294.1
FecR family protein; Manually curated.
 
    0.951
SFS40335.1
Hypothetical protein.
 
     0.821
SFS40306.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.777
SFS65455.1
Protein TonB.
  
   0.630
SFS40273.1
Hypothetical protein.
       0.620
SFS63531.1
Outer membrane transport energization protein TonB (TC 2.C.1.1.1).
  
   0.618
SFS33376.1
Hypothetical protein.
  
     0.606
SFS65465.1
Protein TonB.
  
   0.578
SFS73512.1
Outer membrane transport energization protein TonB.
  
   0.570
SFS49384.1
Hypothetical protein.
  
     0.510
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.