STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS41106.1Periplasmic chaperone for outer membrane proteins Skp. (168 aa)    
Predicted Functional Partners:
SFS46672.1
CarboxypepD_reg-like domain-containing protein.
 
  
 0.671
SFS54727.1
Outer membrane protein OmpA.
  
   0.650
SFS39966.1
Putative DNA-binding domain-containing protein.
  
     0.628
SFS33271.1
Outer membrane protein beta-barrel domain-containing protein.
  
 
   0.619
SFS39568.1
Protein of unknown function.
  
     0.615
SFS48587.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.548
SFS46985.1
Hypothetical protein.
  
     0.531
SFS32069.1
Outer membrane protein OmpA.
  
   0.528
SFS38196.1
Tetratricopeptide repeat-containing protein.
  
  
 0.511
SFS41604.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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