STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS59949.1Ferritin-like metal-binding protein YciE. (164 aa)    
Predicted Functional Partners:
SFS59865.1
General stress protein 26.
  
     0.644
SFS59957.1
Protein of unknown function.
 
     0.603
SFS59964.1
Hypothetical protein.
       0.543
SFS59904.1
Protease I.
 
  
 0.475
SFS59936.1
Hypothetical protein.
       0.451
SFS59944.1
Gas vesicle protein.
       0.451
SFS59929.1
Hypothetical protein.
       0.443
SFS59878.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
 
  
 0.407
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.