STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS59987.1Family of unknown function. (1655 aa)    
Predicted Functional Partners:
SFS59980.1
Outer membrane protein assembly factor BamA.
 
   
 0.950
SFS59917.1
Hypothetical protein.
 
     0.460
SFS48837.1
Starch-binding associating with outer membrane.
  
     0.453
SFS42033.1
SusD family protein.
  
     0.449
SFS42016.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.442
SFS48846.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.442
SFS59970.1
Lipid-binding SYLF domain-containing protein.
       0.430
SFS59745.1
Membrane protein.
 
     0.404
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.