Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS35224.1 | SFS60191.1 | SAMN04488006_0897 | SAMN04488006_2275 | Protein of unknown function. | Transcriptional regulator. | 0.476 |
SFS35224.1 | SFS60193.1 | SAMN04488006_0897 | SAMN04488006_2276 | Protein of unknown function. | Hypothetical protein. | 0.590 |
SFS59297.1 | SFS60191.1 | SAMN04488006_2149 | SAMN04488006_2275 | Hypothetical protein. | Transcriptional regulator. | 0.406 |
SFS60172.1 | SFS60191.1 | SAMN04488006_2274 | SAMN04488006_2275 | Inner membrane protein. | Transcriptional regulator. | 0.788 |
SFS60172.1 | SFS60193.1 | SAMN04488006_2274 | SAMN04488006_2276 | Inner membrane protein. | Hypothetical protein. | 0.844 |
SFS60172.1 | SFS60202.1 | SAMN04488006_2274 | SAMN04488006_2277 | Inner membrane protein. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.418 |
SFS60191.1 | SFS35224.1 | SAMN04488006_2275 | SAMN04488006_0897 | Transcriptional regulator. | Protein of unknown function. | 0.476 |
SFS60191.1 | SFS59297.1 | SAMN04488006_2275 | SAMN04488006_2149 | Transcriptional regulator. | Hypothetical protein. | 0.406 |
SFS60191.1 | SFS60172.1 | SAMN04488006_2275 | SAMN04488006_2274 | Transcriptional regulator. | Inner membrane protein. | 0.788 |
SFS60191.1 | SFS60193.1 | SAMN04488006_2275 | SAMN04488006_2276 | Transcriptional regulator. | Hypothetical protein. | 0.956 |
SFS60191.1 | SFS60202.1 | SAMN04488006_2275 | SAMN04488006_2277 | Transcriptional regulator. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.520 |
SFS60193.1 | SFS35224.1 | SAMN04488006_2276 | SAMN04488006_0897 | Hypothetical protein. | Protein of unknown function. | 0.590 |
SFS60193.1 | SFS60172.1 | SAMN04488006_2276 | SAMN04488006_2274 | Hypothetical protein. | Inner membrane protein. | 0.844 |
SFS60193.1 | SFS60191.1 | SAMN04488006_2276 | SAMN04488006_2275 | Hypothetical protein. | Transcriptional regulator. | 0.956 |
SFS60193.1 | SFS60202.1 | SAMN04488006_2276 | SAMN04488006_2277 | Hypothetical protein. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.512 |
SFS60202.1 | SFS60172.1 | SAMN04488006_2277 | SAMN04488006_2274 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Inner membrane protein. | 0.418 |
SFS60202.1 | SFS60191.1 | SAMN04488006_2277 | SAMN04488006_2275 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Transcriptional regulator. | 0.520 |
SFS60202.1 | SFS60193.1 | SAMN04488006_2277 | SAMN04488006_2276 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Hypothetical protein. | 0.512 |