STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS62979.1Two component transcriptional regulator, LytTR family. (233 aa)    
Predicted Functional Partners:
SFS62964.1
Histidine kinase.
 
  0.959
SFS30187.1
Hypothetical protein.
  
  0.845
SFS42215.1
Histidine kinase.
 
  0.825
SFS38782.1
Histidine kinase.
 
  0.824
SFS58974.1
Hypothetical protein.
 
  0.822
SFS69923.1
Hypothetical protein.
  
  0.819
SFS30358.1
Histidine kinase.
  
  0.816
SFS69802.1
GHKL domain-containing protein.
 
  0.816
SFS41308.1
7TM diverse intracellular signalling.
  
  0.814
SFS30207.1
Two component transcriptional regulator, LytTR family.
  
  
 
0.750
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.