STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS65376.1Chemotaxis protein MotB. (279 aa)    
Predicted Functional Partners:
SFS40564.1
Chemotaxis protein MotB.
  
  
 
0.872
SFS41849.1
Thrombospondin type 3 repeat-containing protein.
  
  0.760
SFS70778.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
   
   0.731
SFS76818.1
OmpA family protein.
  
  0.704
SFS47846.1
PAS domain S-box-containing protein.
  
  
 0.663
SFS71808.1
Peptidase family C25.
  
  
 0.632
SFS32069.1
Outer membrane protein OmpA.
  
  0.592
SFS43134.1
OmpA family protein.
  
  0.591
SFS40520.1
Protein involved in gliding motility GldH.
  
   
 0.586
SFS41835.1
Thrombospondin type 3 repeat-containing protein.
  
 
0.575
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.