Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS30096.1 | SFS42483.1 | SAMN04488006_0385 | SAMN04488006_1271 | YbbR-like protein. | Oxygen tolerance. | 0.501 |
SFS30096.1 | SFS42493.1 | SAMN04488006_0385 | SAMN04488006_1272 | YbbR-like protein. | SH3 domain-containing protein. | 0.553 |
SFS30096.1 | SFS69132.1 | SAMN04488006_0385 | SAMN04488006_2611 | YbbR-like protein. | Protein of unknown function. | 0.417 |
SFS30096.1 | SFS73512.1 | SAMN04488006_0385 | SAMN04488006_2836 | YbbR-like protein. | Outer membrane transport energization protein TonB. | 0.568 |
SFS30096.1 | SFS75452.1 | SAMN04488006_0385 | SAMN04488006_2997 | YbbR-like protein. | Hypothetical protein. | 0.729 |
SFS30096.1 | dacA | SAMN04488006_0385 | SAMN04488006_2134 | YbbR-like protein. | TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.863 |
SFS42483.1 | SFS30096.1 | SAMN04488006_1271 | SAMN04488006_0385 | Oxygen tolerance. | YbbR-like protein. | 0.501 |
SFS42483.1 | SFS42493.1 | SAMN04488006_1271 | SAMN04488006_1272 | Oxygen tolerance. | SH3 domain-containing protein. | 0.989 |
SFS42483.1 | SFS69132.1 | SAMN04488006_1271 | SAMN04488006_2611 | Oxygen tolerance. | Protein of unknown function. | 0.429 |
SFS42483.1 | SFS75452.1 | SAMN04488006_1271 | SAMN04488006_2997 | Oxygen tolerance. | Hypothetical protein. | 0.421 |
SFS42493.1 | SFS30096.1 | SAMN04488006_1272 | SAMN04488006_0385 | SH3 domain-containing protein. | YbbR-like protein. | 0.553 |
SFS42493.1 | SFS42483.1 | SAMN04488006_1272 | SAMN04488006_1271 | SH3 domain-containing protein. | Oxygen tolerance. | 0.989 |
SFS42493.1 | SFS73512.1 | SAMN04488006_1272 | SAMN04488006_2836 | SH3 domain-containing protein. | Outer membrane transport energization protein TonB. | 0.463 |
SFS42493.1 | SFS75452.1 | SAMN04488006_1272 | SAMN04488006_2997 | SH3 domain-containing protein. | Hypothetical protein. | 0.415 |
SFS52107.1 | SFS69132.1 | SAMN04488006_1797 | SAMN04488006_2611 | Hypothetical protein. | Protein of unknown function. | 0.687 |
SFS52107.1 | SFS75452.1 | SAMN04488006_1797 | SAMN04488006_2997 | Hypothetical protein. | Hypothetical protein. | 0.533 |
SFS69132.1 | SFS30096.1 | SAMN04488006_2611 | SAMN04488006_0385 | Protein of unknown function. | YbbR-like protein. | 0.417 |
SFS69132.1 | SFS42483.1 | SAMN04488006_2611 | SAMN04488006_1271 | Protein of unknown function. | Oxygen tolerance. | 0.429 |
SFS69132.1 | SFS52107.1 | SAMN04488006_2611 | SAMN04488006_1797 | Protein of unknown function. | Hypothetical protein. | 0.687 |
SFS69132.1 | SFS73512.1 | SAMN04488006_2611 | SAMN04488006_2836 | Protein of unknown function. | Outer membrane transport energization protein TonB. | 0.668 |
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