STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS75654.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (195 aa)    
Predicted Functional Partners:
SFS69364.1
Glutamate synthase (NADH) large subunit.
    
 0.837
SFS47846.1
PAS domain S-box-containing protein.
   
 0.716
SFS29743.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.710
SFS75612.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.653
SFS75632.1
Putative oxidoreductase.
 
    0.637
SFS80232.1
PAS domain S-box-containing protein.
   
 0.629
SFS75621.1
Transporter family-2 protein.
 
     0.604
SFS75593.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
    
0.595
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.571
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.569
Your Current Organism:
Lutibacter maritimus
NCBI taxonomy Id: 593133
Other names: CCUG 57524, DSM 24450, KCTC 22635, L. maritimus, Lutibacter maritimus Park et al. 2010, Lutibacter sp. S7-2, strain S7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.