Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS32048.1 | SFS39766.1 | SAMN04488006_0635 | SAMN04488006_1049 | Hypothetical protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.659 |
SFS32048.1 | SFS47981.1 | SAMN04488006_0635 | SAMN04488006_1536 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.926 |
SFS32048.1 | SFS48112.1 | SAMN04488006_0635 | SAMN04488006_1547 | Hypothetical protein. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.820 |
SFS32048.1 | SFS54335.1 | SAMN04488006_0635 | SAMN04488006_1986 | Hypothetical protein. | D-amino-acid dehydrogenase. | 0.791 |
SFS32048.1 | SFS54659.1 | SAMN04488006_0635 | SAMN04488006_2017 | Hypothetical protein. | Hypothetical protein. | 0.466 |
SFS32048.1 | SFS69364.1 | SAMN04488006_0635 | SAMN04488006_2626 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.961 |
SFS32048.1 | SFS77761.1 | SAMN04488006_0635 | SAMN04488006_3156 | Hypothetical protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.922 |
SFS32048.1 | hisI | SAMN04488006_0635 | SAMN04488006_0022 | Hypothetical protein. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.416 |
SFS38496.1 | SFS39766.1 | SAMN04488006_0948 | SAMN04488006_1049 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.434 |
SFS38496.1 | SFS47981.1 | SAMN04488006_0948 | SAMN04488006_1536 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Glyoxylase, beta-lactamase superfamily II. | 0.783 |
SFS38496.1 | SFS69364.1 | SAMN04488006_0948 | SAMN04488006_2626 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Glutamate synthase (NADH) large subunit. | 0.410 |
SFS38496.1 | SFS77761.1 | SAMN04488006_0948 | SAMN04488006_3156 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.905 |
SFS38496.1 | rplQ | SAMN04488006_0948 | SAMN04488006_2343 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | LSU ribosomal protein L17P. | 0.858 |
SFS39766.1 | SFS32048.1 | SAMN04488006_1049 | SAMN04488006_0635 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Hypothetical protein. | 0.659 |
SFS39766.1 | SFS38496.1 | SAMN04488006_1049 | SAMN04488006_0948 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.434 |
SFS39766.1 | SFS47981.1 | SAMN04488006_1049 | SAMN04488006_1536 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glyoxylase, beta-lactamase superfamily II. | 0.828 |
SFS39766.1 | SFS48112.1 | SAMN04488006_1049 | SAMN04488006_1547 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.916 |
SFS39766.1 | SFS54659.1 | SAMN04488006_1049 | SAMN04488006_2017 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Hypothetical protein. | 0.872 |
SFS39766.1 | SFS69364.1 | SAMN04488006_1049 | SAMN04488006_2626 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.582 |
SFS39766.1 | SFS77761.1 | SAMN04488006_1049 | SAMN04488006_3156 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.897 |
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