Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0019Identified by match to protein family HMM PF03747. (272 aa)    
Predicted Functional Partners:
FSU_1923
Appr-1-p processing enzyme family protein; Identified by match to protein family HMM PF01661.
    
 0.754
FSU_1628
Putative nitrogen regulatory protein P-II; Identified by similarity to SP:Q52905.
   
 
 0.726
FSU_0018
Hypothetical protein; Identified by glimmer; putative.
       0.651
FSU_2218
Putative type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384.
      0.651
FSU_0020
Conserved hypothetical protein; Identified by match to protein family HMM PF03382; match to protein family HMM TIGR02167.
       0.540
FSU_0017
Conserved hypothetical protein; Identified by similarity to GB:AAN70136.1; Belongs to the CvfB family.
       0.484
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.