STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0099Conserved hypothetical protein; Identified by similarity to GB:AAO76741.1; match to protein family HMM PF01636. (340 aa)    
Predicted Functional Partners:
FSU_0360
Identified by match to protein family HMM PF00483.
 
 0.974
FSU_0100
Putative PTS system, IIA component.
  
    0.779
FSU_0860
Hydrolase, haloacid dehalogenase family; Identified by match to protein family HMM PF00702.
  
  
 0.601
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
     
 0.534
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.527
atpK_2
V-type ATPase, K subunit.
       0.487
FSU_0660
Putative type IV pilus biogenesis protein PilO; Identified by similarity to PIR:S77728.
  
     0.459
atpK_1
V-type ATPase, K subunit.
       0.457
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.