STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0136Putative type II DNA modification methyltransferase; Possibly an isoschizomer of M.SeqORFC57P found in Streptococcus equi ; identified by similarity to SP:P33563; match to protein family HMM PF07669. (492 aa)    
Predicted Functional Partners:
FSU_0137
Putative type II restriction endonuclease; Possibly an isoschizomer of SeqORFC57P found in Streptococcus equi; identified by similarity to SP:P00640; match to protein family HMM PF06616.
     0.994
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.981
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
   
    0.721
FSU_3237
Conserved hypothetical protein; Identified by similarity to GB:AAO36720.1.
  
     0.572
FSU_1996
Lipase domain protein; Identified by similarity to GB:AAF87662.1.
 
    0.500
FSU_1995
Lipase domain protein; Identified by similarity to GB:AAF87662.1.
 
    0.452
FSU_3239
Conserved hypothetical protein; Identified by similarity to PIR:A69229.
  
     0.431
FSU_3231
Hydro-lyase, tartrate/fumarate family; Identified by match to protein family HMM PF05681; match to protein family HMM TIGR00722.
 
     0.413
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.