STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0224FMN reductase, NADPH-dependent domain protein; Identified by match to protein family HMM PF03358. (193 aa)    
Predicted Functional Partners:
FSU_0225
Conserved hypothetical protein; Identified by match to protein family HMM PF06821.
       0.773
FSU_0183
Putative iron-sulfur flavoprotein; Identified by similarity to GB:AAC45465.1; match to protein family HMM PF03358.
  
     0.725
FSU_2367
FMN reductase, NADPH-dependent domain protein; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
  
     0.643
FSU_1419
Conserved hypothetical protein; Identified by similarity to GB:AAM05241.1.
  
     0.620
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00508; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.509
FSU_2370
Conserved domain protein; Identified by similarity to GB:AAM05564.1.
  
     0.471
FSU_0226
Licheninase; Identified by similarity to SP:P17989; match to protein family HMM PF00722.
       0.465
FSU_2212
FMN reductase, NADPH-dependent domain protein; Identified by match to protein family HMM PF03358.
  
     0.424
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.