STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabF_13-oxoacyl-(acyl-carrier-protein) synthase II; Identified by similarity to SP:P39435; match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (409 aa)    
Predicted Functional Partners:
fabD
[acyl-carrier-protein] S-malonyltransferase; Identified by similarity to SP:P25715; match to protein family HMM PF00698; match to protein family HMM TIGR00128.
 0.973
FSU_0265
Putative 3-oxoacyl-(acyl-carrier-protein) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR01831.
 
 0.953
FSU_0266
Thioester dehydrase family protein.
 
  
 0.948
FSU_0270
Identified by match to protein family HMM PF03061.
 
  
 0.910
FSU_0268
Putative membrane protein.
 
     0.890
FSU_0269
Conserved hypothetical protein; Identified by similarity to GB:BAC59150.1.
 
     0.877
FSU_0272
Conserved hypothetical protein; Identified by similarity to GB:AAM43229.1; match to protein family HMM PF03279.
 
    0.853
FSU_0275
Putative acyl carrier protein; Identified by similarity to SP:P11830; match to protein family HMM PF00550.
 
 0.849
FSU_0267
Putative 3-oxoacyl-acyl carrier protein synthase II; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    
0.836
FSU_0361
Putative (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Identified by similarity to SP:P21774; match to protein family HMM PF07977.
 
 
 0.802
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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