STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
fabF_23-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (417 aa)    
Predicted Functional Partners:
fabD
[acyl-carrier-protein] S-malonyltransferase; Identified by similarity to SP:P25715; match to protein family HMM PF00698; match to protein family HMM TIGR00128.
 0.995
FSU_0361
Putative (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Identified by similarity to SP:P21774; match to protein family HMM PF07977.
 
 
 0.884
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Identified by similarity to SP:P21774; match to protein family HMM PF07977.
 
 
 0.881
FSU_0296
Identified by match to protein family HMM PF00501.
    
 0.755
FSU_2621
Putative 4'-phosphopantetheinyl transferase; Identified by similarity to SP:P39135; match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
  
 
 0.729
FSU_1289
Putative pyruvate carboxylase, B subunit; Identified by similarity to SP:Q58628; match to protein family HMM PF00682.
    
 0.690
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.690
FSU_2471
ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
      0.645
nifJ
Pyruvate synthase; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
   
 
 0.644
FSU_2107
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.604
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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