FSU_0300 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FSU_0300

Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470. (298 aa)

Predicted Functional Partners:

hemDX

0.999

hemB

0.964

hemL

0.918

hemC

0.869

FSU_2156

0.867

cysD

0.865

hemA

0.808

FSU_3023

0.737

FSU_0305

0.725

FSU_2192

0.661

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0300	FSU_0305	FSU_0300	FSU_0305	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	nirD domain protein; Identified by similarity to PIR:G83581.	0.725
FSU_0300	FSU_2156	FSU_0300	FSU_2156	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.	0.867
FSU_0300	FSU_2192	FSU_0300	FSU_2192	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Phosphate transporter family protein.	0.661
FSU_0300	FSU_3023	FSU_0300	FSU_3023	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Conserved hypothetical protein; Identified by similarity to PIR:H70859.	0.737
FSU_0300	cysD	FSU_0300	FSU_0549	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Sulfate adenylyltransferase, subunit 2; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.	0.865
FSU_0300	hemA	FSU_0300	FSU_0304	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).	0.808
FSU_0300	hemB	FSU_0300	FSU_0299	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Porphobilinogen synthase; Identified by similarity to SP:P30950; match to protein family HMM PF00490; Belongs to the ALAD family.	0.964
FSU_0300	hemC	FSU_0300	FSU_0303	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.	0.869
FSU_0300	hemDX	FSU_0300	FSU_0301	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Porphyrin biosynthesis protein HemDX; Also 4.2.1.75; identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.	0.999
FSU_0300	hemL	FSU_0300	FSU_0297	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713.	0.918
FSU_0305	FSU_0300	FSU_0305	FSU_0300	nirD domain protein; Identified by similarity to PIR:G83581.	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	0.725
FSU_0305	hemA	FSU_0305	FSU_0304	nirD domain protein; Identified by similarity to PIR:G83581.	glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).	0.472
FSU_0305	hemC	FSU_0305	FSU_0303	nirD domain protein; Identified by similarity to PIR:G83581.	Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.	0.442
FSU_0305	hemDX	FSU_0305	FSU_0301	nirD domain protein; Identified by similarity to PIR:G83581.	Porphyrin biosynthesis protein HemDX; Also 4.2.1.75; identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.	0.712
FSU_2156	FSU_0300	FSU_2156	FSU_0300	Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	0.867
FSU_2156	cysD	FSU_2156	FSU_0549	Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.	Sulfate adenylyltransferase, subunit 2; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.	0.418
FSU_2156	hemDX	FSU_2156	FSU_0301	Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.	Porphyrin biosynthesis protein HemDX; Also 4.2.1.75; identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.	0.735
FSU_2192	FSU_0300	FSU_2192	FSU_0300	Phosphate transporter family protein.	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	0.661
FSU_3023	FSU_0300	FSU_3023	FSU_0300	Conserved hypothetical protein; Identified by similarity to PIR:H70859.	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	0.737
cysD	FSU_0300	FSU_0549	FSU_0300	Sulfate adenylyltransferase, subunit 2; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.	Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.	0.865

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About