FSU_0309 protein (Fibrobacter succinogenes) - STRING interaction network

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FSU_0309

Hypothetical protein; Identified by glimmer; putative. (56 aa)

Predicted Functional Partners:

tgt_1

0.773

FSU_0310

0.505

FSU_0307

0.468

FSU_0306

0.420

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0306	FSU_0307	FSU_0306	FSU_0307	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	0.682
FSU_0306	FSU_0309	FSU_0306	FSU_0309	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Hypothetical protein; Identified by glimmer; putative.	0.420
FSU_0306	tgt_1	FSU_0306	FSU_0308	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	0.427
FSU_0307	FSU_0306	FSU_0307	FSU_0306	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.682
FSU_0307	FSU_0309	FSU_0307	FSU_0309	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	Hypothetical protein; Identified by glimmer; putative.	0.468
FSU_0307	tgt_1	FSU_0307	FSU_0308	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	0.468
FSU_0309	FSU_0306	FSU_0309	FSU_0306	Hypothetical protein; Identified by glimmer; putative.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.420
FSU_0309	FSU_0307	FSU_0309	FSU_0307	Hypothetical protein; Identified by glimmer; putative.	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	0.468
FSU_0309	FSU_0310	FSU_0309	FSU_0310	Hypothetical protein; Identified by glimmer; putative.	Pyridoxal-phosphate dependent TrpB family enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.505
FSU_0309	tgt_1	FSU_0309	FSU_0308	Hypothetical protein; Identified by glimmer; putative.	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	0.773
FSU_0310	FSU_0309	FSU_0310	FSU_0309	Pyridoxal-phosphate dependent TrpB family enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	Hypothetical protein; Identified by glimmer; putative.	0.505
FSU_0310	tgt_1	FSU_0310	FSU_0308	Pyridoxal-phosphate dependent TrpB family enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	0.505
tgt_1	FSU_0306	FSU_0308	FSU_0306	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.427
tgt_1	FSU_0307	FSU_0308	FSU_0307	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.	0.468
tgt_1	FSU_0309	FSU_0308	FSU_0309	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	Hypothetical protein; Identified by glimmer; putative.	0.773
tgt_1	FSU_0310	FSU_0308	FSU_0310	tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]	Pyridoxal-phosphate dependent TrpB family enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.505