STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0315Putative lactase; Identified by similarity to SP:P77989; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family. (943 aa)    
Predicted Functional Partners:
FSU_2272
Alpha-galactosidase; Identified by match to protein family HMM PF02065; match to protein family HMM PF03422.
 
 
 0.893
FSU_0382
Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.
 
  
 0.836
FSU_3272
Conserved domain protein; Identified by match to protein family HMM PF04685.
  
  
  0.793
FSU_2610
Glycosyl hydrolase-like protein; Identified by similarity to GB:CAD86595.1; match to protein family HMM PF00754.
 
  
 0.783
FSU_0816
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.726
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.724
FSU_1367
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; match to protein family HMM PF07676.
  
  
 0.690
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
  
  0.674
FSU_1095
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
  
  0.658
FSU_2262
Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P45796; match to protein family HMM PF03422; match to protein family HMM PF04616.
 
  
  0.640
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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