STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0364Diacylglycerol kinase domain protein; Identified by match to protein family HMM PF00609; match to protein family HMM PF00781. (321 aa)    
Predicted Functional Partners:
FSU_0365
Bacterial transferase hexapeptide domain protein; Identified by match to protein family HMM PF00132.
       0.787
FSU_0363
Putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Identified by similarity to SP:P21645; match to protein family HMM PF00132.
       0.773
groEL
Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.766
FSU_3272
Conserved domain protein; Identified by match to protein family HMM PF04685.
  
  
 0.757
cdsA
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
 
  
 0.652
FSU_1462
Conserved domain protein; Identified by similarity to GB:AAN53510.1.
 
  
  0.644
FSU_0361
Putative (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Identified by similarity to SP:P21774; match to protein family HMM PF07977.
    
 0.574
ald
Aldehyde dehydrogenase; Identified by similarity to SP:P46329; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
     
 0.558
FSU_1524
Identified by match to protein family HMM PF00614.
  
 0.535
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
 
     0.521
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.