Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_0386Conserved hypothetical protein TIGR00255; Identified by similarity to PIR:G97111; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255. (293 aa)    
Predicted Functional Partners:
FSU_2827
Putative histidinol-phosphate phosphatase; Identified by match to protein family HMM PF00459; match to protein family HMM TIGR02067.
 
 
    0.861
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
    0.849
gltB
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
    0.788
metXW
Homoserine O-acetyltransferase/methionine biosynthesis protein; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
    0.778
FSU_1009
Conserved hypothetical protein; Identified by similarity to PIR:C97301; match to protein family HMM PF09579.
 
     0.420
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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