STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0551Hypothetical protein; Identified by glimmer; putative. (339 aa)    
Predicted Functional Partners:
FSU_0552
Sulfate ABC transporter, periplasmic sulfate-binding protein; Identified by similarity to SP:P06997; match to protein family HMM PF01547; match to protein family HMM TIGR00971.
       0.511
cysD
Sulfate adenylyltransferase, subunit 2; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.
       0.433
cysN
Sulfate adenylyltransferase, subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
       0.433
FSU_0547
Putative adenylylsulfate reductase, alpha subunit; Identified by similarity to GB:CAA93322.1; match to protein family HMM PF00890; match to protein family HMM PF03486; match to protein family HMM PF07992.
       0.426
FSU_0548
Ferredoxin; Identified by match to protein family HMM PF00037.
       0.426
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.