Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FSU_0610 | endA | FSU_0610 | FSU_0611 | Dihydrofolate synthase; Identified by similarity to GB:CAC39311.1; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.451 |
| FSU_0853 | endA | FSU_0853 | FSU_0611 | Conserved hypothetical protein; Identified by similarity to GB:AAN42938.1. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.626 |
| FSU_0853 | lysA | FSU_0853 | FSU_2019 | Conserved hypothetical protein; Identified by similarity to GB:AAN42938.1. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.558 |
| FSU_1639 | endA | FSU_1639 | FSU_0611 | Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.474 |
| FSU_1639 | sbcD | FSU_1639 | FSU_1640 | Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.999 |
| endA | FSU_0610 | FSU_0611 | FSU_0610 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Dihydrofolate synthase; Identified by similarity to GB:CAC39311.1; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family. | 0.451 |
| endA | FSU_0853 | FSU_0611 | FSU_0853 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Conserved hypothetical protein; Identified by similarity to GB:AAN42938.1. | 0.626 |
| endA | FSU_1639 | FSU_0611 | FSU_1639 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463. | 0.474 |
| endA | lysA | FSU_0611 | FSU_2019 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.430 |
| endA | rpsD | FSU_0611 | FSU_0612 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.528 |
| endA | sbcD | FSU_0611 | FSU_1640 | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.420 |
| lysA | FSU_0853 | FSU_2019 | FSU_0853 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Conserved hypothetical protein; Identified by similarity to GB:AAN42938.1. | 0.558 |
| lysA | endA | FSU_2019 | FSU_0611 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.430 |
| rpsD | endA | FSU_0612 | FSU_0611 | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.528 |
| sbcD | FSU_1639 | FSU_1640 | FSU_1639 | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Putative nuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463. | 0.999 |
| sbcD | endA | FSU_1640 | FSU_0611 | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Identified by similarity to SP:P25736; match to protein family HMM PF04231. | 0.420 |