STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_0634Putative gliding motility protein MlgA; Identified by similarity to PIR:B32048. (313 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
  
 0.903
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.777
FSU_0633
Putative mglB protein; Identified by similarity to GB:AAA25388.2.
       0.709
FSU_0630
Hypothetical protein; Identified by glimmer; putative.
     
 0.707
FSU_0631
Hypothetical protein; Identified by glimmer; putative.
       0.701
FSU_0632
Hypothetical protein; Identified by glimmer; putative.
       0.701
FSU_0635
Hypothetical protein; Identified by glimmer; putative.
       0.686
FSU_0662
Putative type IV pilus assembly protein PilM; Identified by similarity to PIR:S77726.
  
   
 0.602
FSU_0636
Ribosomal protein S20; Identified by similarity to SP:P02378.
       0.567
FSU_2402
Conserved hypothetical protein; Identified by similarity to GB:AAO22897.1.
  
     0.448
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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