STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin-disulfide reductase; Identified by similarity to SP:P50971; match to protein family HMM PF01134; match to protein family HMM PF07992. (288 aa)    
Predicted Functional Partners:
trx_1
Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
 0.990
trx_2
Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
 
 0.908
FSU_0504
PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.
  
 0.885
FSU_2156
Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.
    
 0.681
gltB
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
    
 0.651
FSU_0167
Identified by similarity to SP:P35160; similarity to SP:P45523; match to protein family HMM PF00578; match to protein family HMM PF08534.
  
 0.650
FSU_1506
Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.
  
 0.650
FSU_0573
Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237; match to protein family HMM TIGR02356.
  
  
 0.644
FSU_2295
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
 0.639
FSU_0861
Aminotransferase, class V; Identified by match to protein family HMM PF00266.
 
 
 0.623
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (14%) [HD]