STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bdhANADH-dependent butanol dehydrogenase A; Identified by similarity to SP:Q04944; match to protein family HMM PF00465. (392 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Identified by similarity to SP:P04079; match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00888.
  
    0.894
ald
Aldehyde dehydrogenase; Identified by similarity to SP:P46329; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 
 0.641
FSU_1931
Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465.
  
  
0.612
adhB
Alcohol dehydrogenase II; Identified by similarity to PIR:A25978; match to protein family HMM PF00465.
  
  
0.607
FSU_0654
Conserved domain protein; Identified by similarity to GB:AAL38648.1.
       0.538
FSU_2203
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
  
 
 0.523
FSU_2555
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
  
 
 0.523
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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