Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FSU_0448 | FSU_0742 | FSU_0448 | FSU_0742 | Peptidase, M22 family; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.977 |
| FSU_0448 | tsaD | FSU_0448 | FSU_2423 | Peptidase, M22 family; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725. | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.963 |
| FSU_0740 | FSU_0742 | FSU_0740 | FSU_0742 | Conserved hypothetical protein; Identified by similarity to GB:BAB81117.1; match to protein family HMM PF07866. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.444 |
| FSU_0740 | nspC | FSU_0740 | FSU_0741 | Conserved hypothetical protein; Identified by similarity to GB:BAB81117.1; match to protein family HMM PF07866. | Carboxynorspermidine decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047. | 0.608 |
| FSU_0742 | FSU_0448 | FSU_0742 | FSU_0448 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Peptidase, M22 family; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725. | 0.977 |
| FSU_0742 | FSU_0740 | FSU_0742 | FSU_0740 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Conserved hypothetical protein; Identified by similarity to GB:BAB81117.1; match to protein family HMM PF07866. | 0.444 |
| FSU_0742 | alr | FSU_0742 | FSU_0233 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.576 |
| FSU_0742 | nnrD | FSU_0742 | FSU_1225 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | 0.669 |
| FSU_0742 | nspC | FSU_0742 | FSU_0741 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Carboxynorspermidine decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047. | 0.589 |
| FSU_0742 | rnhB | FSU_0742 | FSU_3275 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.470 |
| FSU_0742 | tsaD | FSU_0742 | FSU_2423 | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.904 |
| alr | FSU_0742 | FSU_0233 | FSU_0742 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.576 |
| nnrD | FSU_0742 | FSU_1225 | FSU_0742 | YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.669 |
| nspC | FSU_0740 | FSU_0741 | FSU_0740 | Carboxynorspermidine decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047. | Conserved hypothetical protein; Identified by similarity to GB:BAB81117.1; match to protein family HMM PF07866. | 0.608 |
| nspC | FSU_0742 | FSU_0741 | FSU_0742 | Carboxynorspermidine decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.589 |
| rnhB | FSU_0742 | FSU_3275 | FSU_0742 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.470 |
| tsaD | FSU_0448 | FSU_2423 | FSU_0448 | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Peptidase, M22 family; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725. | 0.963 |
| tsaD | FSU_0742 | FSU_2423 | FSU_0742 | Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | ATPase, YjeE family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. | 0.904 |