STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0792Hypothetical protein; Identified by glimmer; putative. (927 aa)    
Predicted Functional Partners:
FSU_2403
Identified by match to protein family HMM TIGR01352.
  
  
 0.791
FSU_0810
Glycosyl hydrolase, family 9; Identified by similarity to SP:P04954; match to protein family HMM PF00041; match to protein family HMM PF00759.
  
  
  0.782
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
   
 0.781
FSU_0816
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.771
FSU_0459
Conserved hypothetical protein.
  
  
  0.770
FSU_2298
Acyltransferase family protein.
  
     0.770
FSU_0286
Fimbriae-associated domain protein; Identified by similarity to GP:3929312.
  
   
 0.765
FSU_2398
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
  
     0.761
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.759
FSU_2397
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.757
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.