FSU_0910 protein (Fibrobacter succinogenes) - STRING interaction network

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FSU_0910

RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (371 aa)

Predicted Functional Partners:

trmH

0.704

FSU_0909

0.560

FSU_0908

0.545

FSU_0911

0.543

rplO

0.531

rplC

0.514

FSU_1567

0.511

rplM

0.499

FSU_0879

0.492

rplU

0.478

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0879	FSU_0910	FSU_0879	FSU_0910	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.492
FSU_0879	rplC	FSU_0879	FSU_1890	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.918
FSU_0879	rplM	FSU_0879	FSU_1421	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.916
FSU_0879	rplO	FSU_0879	FSU_1871	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.937
FSU_0879	rplU	FSU_0879	FSU_0312	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.935
FSU_0879	trmH	FSU_0879	FSU_1451	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	RNA methyltransferase, TrmH family; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.492
FSU_0908	FSU_0909	FSU_0908	FSU_0909	Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF00570; match to protein family HMM PF01612.	5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	0.875
FSU_0908	FSU_0910	FSU_0908	FSU_0910	Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF00570; match to protein family HMM PF01612.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.545
FSU_0908	FSU_1567	FSU_0908	FSU_1567	Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF00570; match to protein family HMM PF01612.	Exoribonuclease, VacB/RNase II family; Identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358.	0.960
FSU_0909	FSU_0908	FSU_0909	FSU_0908	5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF00570; match to protein family HMM PF01612.	0.875
FSU_0909	FSU_0910	FSU_0909	FSU_0910	5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.560
FSU_0910	FSU_0879	FSU_0910	FSU_0879	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090.	0.492
FSU_0910	FSU_0908	FSU_0910	FSU_0908	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF00570; match to protein family HMM PF01612.	0.545
FSU_0910	FSU_0909	FSU_0910	FSU_0909	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	5-formyltetrahydrofolate cyclo-ligase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	0.560
FSU_0910	FSU_0911	FSU_0910	FSU_0911	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Conserved domain protein; Identified by match to protein family HMM PF08757.	0.543
FSU_0910	FSU_1567	FSU_0910	FSU_1567	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Exoribonuclease, VacB/RNase II family; Identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358.	0.511
FSU_0910	rplC	FSU_0910	FSU_1890	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.514
FSU_0910	rplM	FSU_0910	FSU_1421	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.499
FSU_0910	rplO	FSU_0910	FSU_1871	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.531
FSU_0910	rplU	FSU_0910	FSU_0312	RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.478

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