Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
speAArginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine. (632 aa)    
Predicted Functional Partners:
FSU_0920
Putative saccharopine dehydrogenase; Identified by similarity to GP:29895023; match to protein family HMM PF03435.
    
 0.743
FSU_0241
Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family.
 
  
 0.657
FSU_3136
Conserved hypothetical protein; Identified by similarity to GB:AAO76206.1.
  
 
 0.643
argH
Argininosuccinate lyase; Identified by similarity to SP:O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838.
     
 0.552
argA
Amino-acid N-acetyltransferase; Identified by similarity to SP:P08205; match to protein family HMM PF00583; match to protein family HMM PF00696; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family.
 
  
 0.548
FSU_0922
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
       0.505
FSU_0923
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
       0.505
FSU_0924
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
       0.498
FSU_0925
Hydrolase, NUDIX family; Identified by similarity to GP:28272372; match to protein family HMM PF00293; match to protein family HMM PF09297.
       0.498
trxB
Thioredoxin-disulfide reductase; Identified by similarity to SP:P50971; match to protein family HMM PF01134; match to protein family HMM PF07992.
     
  0.483
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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