STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0922Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name. (288 aa)    
Predicted Functional Partners:
FSU_0923
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
 
    
0.831
FSU_0924
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
 
    
0.826
FSU_0925
Hydrolase, NUDIX family; Identified by similarity to GP:28272372; match to protein family HMM PF00293; match to protein family HMM PF09297.
       0.762
FSU_0497
Glycosyltransferase; Identified by similarity to GB:AAC44786.1; match to protein family HMM PF00535.
  
     0.758
FSU_3228
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
     0.750
FSU_3225
Putative capsular polysaccharide biosynthesis glycosyltransferase; Identified by similarity to GB:BAA82284.1; match to protein family HMM PF00535.
  
     0.712
FSU_2576
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
     0.669
speA
Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine.
       0.505
FSU_1430
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
     0.409
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.